HDF  1`TREEHEAPXminc-2.0@pTREE HEAPX(dimensionsinfoimage0SNOD Pp TREE@!HEAPX yspacexspacezspace8SNOD( 0 X x TREE@HEAPX processing@8TREEpHEAPXX0HTREE-HEAPX0image-minimage-maximage(SNOD5 Pident*lepagecl:cp2428:2015.08.12.22.35.49:452:1  U xtransformation0-filename</home/lepagecl/BIGBRAIN/pm3903//nl_transform/rsl/flipyz.xfmSNOD( transformation0-filedata\MNI Transform File Transform_Type = Linear; Linear_Transform = 1 0 0 0 0 0 1 0 0 1 0 0; x^  onŢx^  onŢ ?@4 4U 0 length  8varidMINC standard variable"SNOD`%( ( 0vartypedimension____ 8versionMINC Version 1.0 X comments/Y increases from patient posterior to anterior 0spacing regular__ 0 alignmentcentre 0 dimorderyspace `direction_cosines ?@4 4? (unitsmm 8 spacetype native____ 8step ?@4 4{Gz? 8start ?@4 4x ?@4 4U 0 length  8varidMINC standard variable 0vartypedimension____ 8versionMINC Version 1.0 P comments'X increases from patient left to right 0spacing regular__ 0 alignmentcentre `direction_cosines ?@4 4? (unitsmm 8 spacetype native____ 8step ?@4 4e? 8start ?@4 4 Q ?@4 4U 0 length  8varidMINC standard variable 0vartypedimension____ 8versionMINC Version 1.0 X comments.Z increases from patient inferior to superior 0spacing regular__ 0 alignmentcentre `direction_cosines ?@4 4? (unitsmm 8 spacetype native____ 8step ?@4 4e? 8start ?@4 4DJ  ?@4 4U 8varidMINC standard variable.x 0 dimorderyspaceSNOD(2P/x, 8versionMINC Version 1.0 0vartypevar_attribute X ?@4 4@U 8varidMINC standard variable 8versionMINC Version 1.0 0 dimorderyspace 0vartypevar_attribute @  deflate  >LU @ dimorderyspace,xspace,zspace 8varidMINC standard variable 0vartypegroup________ 8versionMINC Version 1.0 P valid_range ?@4 4@ 0 completetrue_Hh historyThu Jul 30 06:04:15 2015>>> minccalc -quiet -clobber -range 0 65535 -expression if(A[0]>64000){65535}else{clamp(A[0]*A[1]/A[2],0,65535)} /ltmp/lepagecl/fix-0wxcRV/pm0001o_cropped.mnc /ltmp/lepagecl/fix-0wxcRV/field0002.mnc /ltmp/lepagecl/fix-0wxcRV/field0001.mnc /ltmp/lepagecl/fix-0wxcRV/pm0001o_norm_cropped.mnc Thu Jul 30 06:04:17 2015>>> mincresample -quiet -clobber -like /home/lepagecl/BIGBRAIN/pm3903//nl_transform/rsl/pm0001o.mnc -fill -fillvalue 0 -clob -keep_real_range -range 0 65535 /ltmp/lepagecl/fix-0wxcRV/pm0001o_norm_cropped.mnc /home/lepagecl/BIGBRAIN/pm3903//nl_transform/bspline/pm0001o.mnc Fri Jul 31 00:13:32 2015>>> mincresample -quiet -clobber -unsigned -short -nearest -use_input_sampling -transform /home/lepagecl/BIGBRAIN/pm3903//nl_transform/rsl/flipyz.xfm -keep_real_range -start -70.6666 0 -58.7777 -nelements 6572 1 5711 -step 0.0211666666666666 0.02 0.0211666666666666 -range 0 65535 /home/lepagecl/BIGBRAIN/pm3903//nl_transform/bspline/pm0001o.mnc /home/lepagecl/BIGBRAIN/pm3903//tmp/pm0001_new.mnc Fri Jul 31 00:13:37 2015>>> mincreshape -quiet -clobber -unsigned -short -valid_range 0 65535 -image_range 0 65535 /home/lepagecl/BIGBRAIN/pm3903//tmp/pm0001_new.mnc /home/lepagecl/BIGBRAIN/pm3903//nl_transform/a3d/pm0001o.mnc Wed Aug 12 21:45:00 2015>>> mincreshape -quiet -clobber -unsigned -short -image_range 0 65535 -valid_range 0 65535 -start 240,0,0 -count 10,1,6572 -dimorder yspace,xspace,zspace /home/lepagecl/BIGBRAIN/pm3903//nl_transform/a3d/pm0001o.mnc /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/strip0001.mnc Wed Aug 12 22:05:06 2015>>> mincconcat -clob -quiet -unsigned -short -filelist /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/filelist -concat_dimension yspace -sequential /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/new.mnc Wed Aug 12 22:08:48 2015>>> minccalc -quiet -clob -expression clamp(65535-A[0],0,65535) /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/new.mnc /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/new_neg.mnc Wed Aug 12 22:35:49 2015>>> mincreshape -clob -quiet -unsigned -short -start 0,0,9 -count 7404,6572,1 -image_range 0 65535 -dimorder yspace,xspace,zspace /home/lepagecl/BIGBRAIN/pm3903//tmp/axial0241/new.mnc /home/lepagecl/BIGBRAIN/pm3903//nl_transform/loris/axial/minc/pm0250o.mnc TREEOJ>x^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^1 00ӁSC<$*#l x^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢTREE)OJ8"&*.hu2S61:LVmZK^0)b|fim`qu]yD;}(Ոt oXM+ <ŧ l_=P4qOTREE9>(L`J>N0R|UY]`arePiD.m qt(xt| bX@<ړ tlR0Pײ4  q O -d   H   a, ?x   \   s@Q/ $p TcAx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^  onŢx^1 /Bx iS